279,620 packages matching “single-cell”

scran.js

v4.1.0 · 9 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single cell RNA-seq analysis in Javascript

161Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.0 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-marker-gene-heatmap

v2.7.6 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single Cell Expression Atlas experiment cell type marker genes heatmap

98Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.7.6 (the latest release), from the OSV.dev database.

@haniffalab/cherita-react

v2.1.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A React component library designed for data visualisation and analysis of single-cell and spatial multi-omics data.

268Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.1.0 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-tsne-widget

v2.5.1 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

tSNE widget visualizes Single Cell Expression Atlas data

22Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.5.1 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-gene-search-form

v2.1.5 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single Cell Expression Atlas homepage gene search form

25Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.1.5 (the latest release), from the OSV.dev database.

bakana-remotes

v2.2.2 · 1 day ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Fetch remote single-cell RNA-seq datasets for input into the bakana analysis pipeline.

17Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.2.2 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-cell-type-wheel-heatmap

v1.4.24 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Cell type wheel with heatmap and search box for Single Cell Expression Atlas

33Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.4.24 (the latest release), from the OSV.dev database.

scellop

v0.2.0 · 4 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Scalable visualization for single-cell data - interactive heatmaps with metadata

28Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.0 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-faceted-search-results

v4.1.12 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Faceted experiments list for Single Cell Expression Atlas gene search results

31Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.12 (the latest release), from the OSV.dev database.

valkana

v1.0.0-alpha.3 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Validate the output files produced by the bakana single-cell analysis pipelines.

46Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0-alpha.3 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-experiment-page

v1.1.3 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single cell experiment page integration component

21Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.3 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-tsne-plot

v6.4.1 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A twin plot of metadata and gene expression to display t-SNE plots in Single Cell Expression Atlas

41Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v6.4.1 (the latest release), from the OSV.dev database.

@haybarn/ext-anndata-h1-5-5

v202608.20.64827 · 25 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Read AnnData (.h5ad) files for single-cell genomics data analysis, with support for local and remote (HTTP/HTTPS/S3) files

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v202608.20.64827 (the latest release), from the OSV.dev database.

@ebi-gene-expression-group/scxa-cell-type-marker-gene-heatmap

v1.1.0-rc1.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single Cell Expression Atlas experiment cell type marker genes heatmap

5Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.0-rc1.1 (the latest release), from the OSV.dev database.

expression-atlas-tsne-plot

v1.4.0 · 8 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A t-SNE visualisation component for Single Cell Expression Atlas

6Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.4.0 (the latest release), from the OSV.dev database.

prosemirror-tables

v1.8.5 · 9 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

ProseMirror's rowspan/colspan tables component

13.3MDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.8.5 (the latest release), from the OSV.dev database.

ebi-scea-tsne-widget

v1.0.0-rc2 · 7 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

tSNE widget visualizes Single Cell Expression Atlas data

4Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0-rc2 (the latest release), from the OSV.dev database.

bakana

v3.1.3 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Backend for kana's single-cell analyses. This supports single or multiple samples, execution in Node.js or the browser, in-memory caching of results for iterative analyses, and serialization to/from file for redistribution.

103Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.1.3 (the latest release), from the OSV.dev database.

vitessce-jupyter

v0.1.15 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Jupyter widget facilitating interactive visualization of spatial single-cell data with Vitessce

3Downloads across all versions in the last 7 days, from the official npm downloads API.

No known vulnerabilities

Known vulnerabilities affecting v0.1.15 (the latest release), from the OSV.dev database.

scmd-ui

v2.0.0 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Single-cell multi-dataset user interface components.

3Downloads across all versions in the last 7 days, from the official npm downloads API.

No known vulnerabilities

Known vulnerabilities affecting v2.0.0 (the latest release), from the OSV.dev database.
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