42 packages matching Genbank

genbank-parser

v3.0.0 · 5 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Parse genbank files

3.9KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.0.0 (the latest release), from the OSV.dev database.

seqparse

v0.2.2 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common format

5.1KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.2 (the latest release), from the OSV.dev database.

@lsbjordao/genbank-js

v1.0.2 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

NCBI GenBank / E-utilities client for Node.js

7Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.2 (the latest release), from the OSV.dev database.

biojs-vis-genbank

v0.1.6 · 11 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

genbank parser for genbank files

8Downloads across all versions in the last 7 days, from the official npm downloads API.

No known vulnerabilities

Known vulnerabilities affecting v0.1.6 (the latest release), from the OSV.dev database.

@bioscript/seq-format

v0.2.3 · 17 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Bioinformatics file format converters and parsers (GenBank, EMBL, GFF/GTF, BED, VCF, SAM text)

48Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.3 (the latest release), from the OSV.dev database.

@ncbijs/genbank

v0.1.1 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

GenBank flat file parser for protein and nucleotide records

4Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

@carabennemsi/plasmid

v0.1.3 · 28 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Dependency-free plasmid map renderer — turn a DNA sequence or FASTA/GenBank file into a standalone circular-map SVG. Runs in Node and the browser.

12Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.3 (the latest release), from the OSV.dev database.

genbank

v0.0.1 · 10 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JavaScript parser for the GenBank Flat File (GBF) format

6Downloads across all versions in the last 7 days, from the official npm downloads API.BSDLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.1 (the latest release), from the OSV.dev database.

genbankjs

v0.1.0 · 7 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JavaScript parser for the GenBank Flat File (GBF) format

18Downloads across all versions in the last 7 days, from the official npm downloads API.BSD-2-ClauseLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.0 (the latest release), from the OSV.dev database.

bio-geolocation

v0.1.1 · 8 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Parses Fasta file and pulls data from GenBank

3Downloads across all versions in the last 7 days, from the official npm downloads API.WTFPLLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

@phantomas1234/seqviz

v3.3.10 · 4 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

DNA sequence viewer. Supports custom, GenBank, FASTA, or NCBI accession input

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.3.10 (the latest release), from the OSV.dev database.

cgparse

v1.1.2 · 11 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Converts sequence files (GenBank, EMBL, FASTA) and feature files (GFF3, GTF, BED, CSV) to JSON and CGView JSON

14Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.2 (the latest release), from the OSV.dev database.

fastA_node

v0.0.2 · 10 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Downloads sequences in fastA format from GenBank

1Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.2 (the latest release), from the OSV.dev database.

@ncbijs/nucleotide

v0.1.1 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typed client for NCBI Nucleotide database (EFetch) with FASTA and GenBank format support

3Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

@glysade/bio-parsers

v4.1.8 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A library of parsers for interconverting between genbank, fasta, and (eventually) sbol through Teselagen's intermediary json format

4Downloads across all versions in the last 7 days, from the official npm downloads API.ISCLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.8 (the latest release), from the OSV.dev database.

biojs-io-genbank

v0.1.2 · 11 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

PP2_Demo ========

8Downloads across all versions in the last 7 days, from the official npm downloads API.ISCLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.2 (the latest release), from the OSV.dev database.

@ncbijs/protein

v0.1.1 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typed client for NCBI Protein database (EFetch) with FASTA and GenBank format support

2Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

gensplore

v0.0.5 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

React component for displaying genbank files

0Downloads across all versions in the last 7 days, from the official npm downloads API.

No known vulnerabilities

Known vulnerabilities affecting v0.0.5 (the latest release), from the OSV.dev database.

gbson

v1.0.74 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Parser for the popular GenBank file format including json format type definition (used by the GeSeq annotation software)

1Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.74 (the latest release), from the OSV.dev database.

sboljs

v3.0.2 · 4 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A library for the Synthetic Biology Open Language (SBOL) written in TypeScript, for JavaScript/TypeScript applications in the browser or node.js.

36Downloads across all versions in the last 7 days, from the official npm downloads API.BSD-2-ClauseLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.0.2 (the latest release), from the OSV.dev database.
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