126 packages matching “JBrowse”

@gmod/jbrowse-core

v0.0.1-beta.22 · 6 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 core libraries used by plugins

12Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.1-beta.22 (the latest release), from the OSV.dev database.

jbrowse-plugin-icgc

v1.0.2 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 plugin to integrate resources from the ICGC

5Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.2 (the latest release), from the OSV.dev database.

@jbrowse/display-ui

v4.3.0 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

The UI a display draws that is not data: the swappable chrome contract, its toolkit-free implementations, and the track overlay layer

601Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@gmod/jbrowse-development-tools

v0.0.1-beta.26 · 6 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Tools to help with developing and building JBrowse 2 plugins

7Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.1-beta.26 (the latest release), from the OSV.dev database.

@jbrowse/cigar-utils

v4.1.14 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Pure CIGAR / MD / mismatch parsers and types — no rendering or framework deps

528Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.14 (the latest release), from the OSV.dev database.

@jbrowse/modifications-utils

v4.1.14 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Pure MM/ML base-modification tag parsers (methylation, etc.)

260Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.14 (the latest release), from the OSV.dev database.

jbrowse-plugin-hgb

v0.1.0 · 4 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 HGB API plugin

4Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.0 (the latest release), from the OSV.dev database.

@jbrowse/wiggle-core

v4.3.0 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Shared scale and autoscale utilities for wiggle and coverage displays

305Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

jbrowse-plugin-quantseq

v0.0.6 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

This is an external plugin for the [JBrowse 2](https://jbrowse.org/jb2/) open-source platform for visualizing and integrating biological data. This plugin implements a QuantitativeSequence (quantseq) track type. It builds on the concept of a "dynamic sequ

13Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.6 (the latest release), from the OSV.dev database.

sails-hook-jbrowse

v1.0.3 · 10 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Provides backend support for JBrowse to write comment track changes to trackData.json file

8Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.3 (the latest release), from the OSV.dev database.

jbrowse-nclist-cli

v1.0.3 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

This CLI gets the genes with in a location range from JBrowse

8Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.3 (the latest release), from the OSV.dev database.

agr_genomefeaturecomponent

v0.3.24 · 4 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Provides SVG View for Genome Features rendered with the Apollo Track Web Service via JBrowse

54Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.3.24 (the latest release), from the OSV.dev database.

jbrowse-plugin-refget-api

v1.1.0 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A JBrowse Plugin to fetch assembly sequences from GA4GH RefGet compliant servers

3Downloads across all versions in the last 7 days, from the official npm downloads API.ISCLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.0 (the latest release), from the OSV.dev database.

apollo-xreflink-plugin

v0.0.7 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

> Template to quickly start a new JBrowse plugin

7Downloads across all versions in the last 7 days, from the official npm downloads API.Apache License 2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.7 (the latest release), from the OSV.dev database.

@intermine/bluegenes-jbrowse-tool

v1.0.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Bluegenes JBrowse Tool is a tool made for [BlueGenes](http://bluegenes.apps.intermine.org) following BlueGenes Tool API. Add more description of your tool here! :)

8Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

@jbrowse/quick-lru

v7.3.5 · 9 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Simple “Least Recently Used” (LRU) cache, forked from sindresorhus/quick-lru for CJS

10.5KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v7.3.5 (the latest release), from the OSV.dev database.

jbrowse-plugin-multilevel-linear-view

v1.0.0 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse plugin for the multilevel linear view

0Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0 (the latest release), from the OSV.dev database.

@cmdcolin/jbrowse-plugin-hubs

v1.0.16 · 2 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

For automatically adding connections to jb2hubs

162Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.16 (the latest release), from the OSV.dev database.

@erleholgersen/plugin-predictions

v0.0.4 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

> Template to quickly start a new JBrowse plugin

2Downloads across all versions in the last 7 days, from the official npm downloads API.

No known vulnerabilities

Known vulnerabilities affecting v0.0.4 (the latest release), from the OSV.dev database.

@gnomix/jbrowse-web

v4.1.14 · 5 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A standalone, customizable JBrowse 2 Web genome browser for building genomic web applications

1Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.1.14 (the latest release), from the OSV.dev database.
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