126 packages matching “JBrowse”

jbrowse-plugin-graphgenomeviewer

v4.0.28 · 2 hours ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 graph genome (pangenome) view: rGFA reference-anchored layouts, the Bandage force-directed engine, and haplotype lanes read from a gbz-base database

4.9KDownloads across all versions in the last 7 days, from the official npm downloads API.GPL-3.0-or-laterLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.0.28 (the latest release), from the OSV.dev database.

@jbrowse/plugin-linear-comparative-view

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 linear comparative view

684Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

jbrowse-plugin-protein3d

v0.15.2 · 5 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A 3-D protein structure viewer for JBrowse 2, linked residue by residue to the genome.

555Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.15.2 (the latest release), from the OSV.dev database.

@jbrowse/web-core

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 code shared between web-app type products

697Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@gmod/nclist

v3.0.14 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Read features from JBrowse 1 format nested containment list JSON

8.1KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.0.14 (the latest release), from the OSV.dev database.

@jbrowse/react-app2

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 app React component

352Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

jbrowse-plugin-reactome2

v2.0.1 · 13 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 plugin to integrate resources from Reactome

267Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.0.1 (the latest release), from the OSV.dev database.

@jbrowse/plugin-blat

v4.3.0 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 UCSC BLAT client

180Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

jbrowse-plugin-gwas

v2.1.6 · 6 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 GWAS API plugin

74Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.1.6 (the latest release), from the OSV.dev database.

@jbrowse/text-indexing-core

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 core text indexing routines for parsing GFF3 and VCF files

638Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@jbrowse/plugin-jobs-management

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 jobs management

185Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@jbrowse/text-indexing

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 text indexing for desktop

172Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@jbrowse/capture

v4.3.0 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Drive a JBrowse 2 instance with Puppeteer and screenshot it once it has actually finished rendering

168Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@apollo-annotation/jbrowse-plugin-apollo

v1.1.3 · 6 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Apollo plugin for JBrowse 2

105Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.3 (the latest release), from the OSV.dev database.

@jbrowse/plugin-maf

v4.2.1 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 multiple alignment format (MAF) viewer

191Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.2.1 (the latest release), from the OSV.dev database.

@jbrowse/plugin-text-indexing

v4.3.0 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 text indexing rpc method

186Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.3.0 (the latest release), from the OSV.dev database.

@jbrowse/plugin-gwas

v4.2.1 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBrowse 2 GWAS adapters, tracks, and Manhattan plot displays

184Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.2.1 (the latest release), from the OSV.dev database.

jbh-jblast

v0.0.243 · 9 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

JBlast - Integrated JBrowse BLAST with Galaxy (JBrowse Server Hook)

52Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.243 (the latest release), from the OSV.dev database.

mgnify-jbrowse

v0.1.12 · 7 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

React components for embedding JBrowse genome viewers in MGnify (GeneViewer, JBrowseContigViewer)

18Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.12 (the latest release), from the OSV.dev database.

@jbrowse/development-tools

v2.2.1 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Tools to help with developing and building JBrowse 2 plugins

104Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.2.1 (the latest release), from the OSV.dev database.
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