63 packages matching “genomes”

@epi2melabs/igv-jupyterlab

v1.0.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

igv-jupyterlab is an extension for Jupyter Lab and traditional Jupyter Notebooks which wraps igv.js.

12Downloads across all versions in the last 7 days, from the official npm downloads API.BSD-3-ClauseLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

mitochondrial-muscle

v0.1.0 · 8 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

This is Node.js wrapper over [MUSCLE](http://drive5.com/muscle/) software specifically for mitochondrial genomes aligning.

0Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.0 (the latest release), from the OSV.dev database.

@sjcrh/proteinpaint-container

v2.22.1 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

This distribution creates a Docker image with all of the system requirements for running the Proteinpaint application.

59Downloads across all versions in the last 7 days, from the official npm downloads API.SEE LICENSE IN ./LICENSELicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.22.1 (the latest release), from the OSV.dev database.

@rotifer/mcp-server

v0.16.1 · 5 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Rotifer MCP Server — AI agents search, compare, and rank Genes (modular AI skills) from a living ecosystem of 50+ capabilities. Zero config.

574Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.16.1 (the latest release), from the OSV.dev database.

gtdb-local

v0.0.13-0 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typescript implementation of pouchDB instance loaded with the GTDB

28Downloads across all versions in the last 7 days, from the official npm downloads API.CC0-1.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.13-0 (the latest release), from the OSV.dev database.

molart

v1.17.0 · 2 years ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

MOLeculAR structure annoTator

139Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.17.0 (the latest release), from the OSV.dev database.

genetic-search

v13.5.0 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Multiprocessing genetic algorithm implementation library

127Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v13.5.0 (the latest release), from the OSV.dev database.

@aigx/cli

v1.3.1 · 2 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

The AIGX (AI Genome Exchange) CLI — init, lint, resolve, doctor, format, and conformance-check your codebase's AI-agent genome. Zero dependencies.

2Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.3.1 (the latest release), from the OSV.dev database.

block-genomics-mcp

v0.1.2 · 13 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

MCP server for Block Genomics (Nexus Protocol). Gives any MCP-capable AI agent live access to verified Bitcoin blocks, on-chain ownership, agent directories, guardians, badges, and experiences — plus the authenticated agent runtime (heartbeat / brief / ev

347Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.2 (the latest release), from the OSV.dev database.

mist3-ts

v0.7.13-0 · 6 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typescript package to access MiST3 API

30Downloads across all versions in the last 7 days, from the official npm downloads API.CC0-1.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.7.13-0 (the latest release), from the OSV.dev database.

@ruvector/rvdna

v0.3.1 · 5 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

rvDNA — AI-native genomic analysis. 20-SNP biomarker risk scoring, streaming anomaly detection, 64-dim profile vectors, 23andMe genotyping, CYP2D6/CYP2C19 pharmacogenomics, variant calling, protein prediction, and HNSW vector search.

30Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.3.1 (the latest release), from the OSV.dev database.

hoodini-viz

v0.2.20 · 6 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Interactive phylogenetic and genomic visualization library

66Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.20 (the latest release), from the OSV.dev database.

genetic-engineering-module

v1.4.6 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

genetic engineering within JS

20Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.4.6 (the latest release), from the OSV.dev database.

@ncbijs/http-mcp

v0.1.1 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

MCP server exposing NCBI biomedical tools for LLM agents

13Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

swirlnet-solver-async

v1.0.5 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A basic single- and mulit-core framework for evolving networks with swirlnet

9Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.5 (the latest release), from the OSV.dev database.

mgnify-jbrowse

v0.1.12 · 6 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

React components for embedding JBrowse genome viewers in MGnify (GeneViewer, JBrowseContigViewer)

33Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.12 (the latest release), from the OSV.dev database.

@tomek7667/tmk-biotech

v1.0.8 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Used for reading fasta and fastq files and structuring as valid javascript objects. The package provides also some useful utility functions like complementarify used for getting complementary sequence, or sanitizeGenome for sanitizing user input.

11Downloads across all versions in the last 7 days, from the official npm downloads API.ISCLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.8 (the latest release), from the OSV.dev database.

swirlnet

v1.0.3 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Neuroevolution library based on NEAT (NeuroEvolution of Augmenting Topologies)

11Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.3 (the latest release), from the OSV.dev database.

swirlnet.make-net

v1.0.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Generate neural networks from swirlnet phenotypes

4Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

iham

v1.0.3 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

interactive HOG Analysis Method visualisation plugin

7Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.3 (the latest release), from the OSV.dev database.
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