.fasta and .fastq parsers

DataFire integration for FaSta - Station Facilities Status

A Simple FastaUtility tool for fasta files.This modules is used for just parsing.

A QuantLab extension for rendering Fasta files.

Parses Fasta file and pulls data from GenBank

DNA parser of fna (FASTA) format

read indexed fasta and bgzipped fasta formats

DNA sequence viewer. Supports custom, GenBank, FASTA, or NCBI accession input

generate DNA sequence with SNV and Structural Variations from FASTA format

Converts sequence files (GenBank, EMBL, FASTA) and feature files (GFF3, GTF, BED, CSV) to JSON and CGView JSON

Biological parsers

A unique visualisation of any large chunk of DNA or RNA residing in ASCII text files (such as FASTA, GBK etc and also just .txt like my hand-made test files), AminoSee is a way to render huge genomics files into a left-to-right top-bottom PNG linear image

Utilities for Working with Bioinformatics Files (fasta, fna, nexus and newick) in JavaScript

Typed client for NCBI Nucleotide database (EFetch) with FASTA and GenBank format support

Fasta file to json.

read indexed fasta and bgzipped fasta formats

Downloads sequences in fastA format from GenBank

Work In Progress. A global npm module for processing data from ncbi into fasta files. Currently only working on Mac and Linux.

Used for reading fasta and fastq files and structuring as valid javascript objects. The package provides also some useful utility functions like complementarify used for getting complementary sequence, or sanitizeGenome for sanitizing user input.

read CRAM files with pure Javascript