18,068 packages matching “sequence alignment”

biomsa

v0.3.3 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Multiple Sequence Alignment for the Browser

5.5KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.3.3 (the latest release), from the OSV.dev database.

seqalign

v1.0.6 · 4 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Collection of sequence alignment algorithms.

107Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.6 (the latest release), from the OSV.dev database.

@galaxyproject/alignmentviewer

v0.0.3 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

This repository provides a Galaxy visualization plugin for **Sequence Alignment Viewer 2.0**, built directly from the official GitHub source code.

896Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.3 (the latest release), from the OSV.dev database.

msa-parsers

v8.4.1 · 12 hours ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A TypeScript library for parsing multiple sequence alignment (MSA) files and related formats.

410Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v8.4.1 (the latest release), from the OSV.dev database.

sequence-alignment

v0.0.8 · 6 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Sequence Alignment Algorithms implemented in Javascript, with a command line application

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.8 (the latest release), from the OSV.dev database.

local-alignment

v1.0.3 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Performs local sequence alignment of two strings using the Smith-Waterman algorithm

57Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.3 (the latest release), from the OSV.dev database.

jbrowse-plugin-msaview

v3.10.0 · 11 hours ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A multiple sequence alignment and phylogenetic tree viewer for JBrowse 2, linked column by column to the genome. It packages [react-msaview](https://github.com/GMOD/react-msaview), whose [user guide](https://github.com/GMOD/react-msaview/blob/main/docs/us

530Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.10.0 (the latest release), from the OSV.dev database.

vue-msa-overview

v1.0.0 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Vue component for displaying an overview of a multiple sequence alignment

4Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0 (the latest release), from the OSV.dev database.

seal-wasm

v0.0.3 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A WASM package of Needleman-Wunsch & Smith-Waterman sequence alignment.

3Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.3 (the latest release), from the OSV.dev database.

node-edlib

v1.1.2 · 9 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Wrapper for edlib sequence alignment library

7Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.2 (the latest release), from the OSV.dev database.

reseqtjs

v1.0.1 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

High-performance multiple sequence alignment viewer for React

12Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

@bioscript/seq-align

v0.2.3 · 1 month ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Pairwise sequence alignment algorithms (Needleman-Wunsch, Smith-Waterman) with BLOSUM and PAM scoring matrices.

2Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.3 (the latest release), from the OSV.dev database.

@ncbijs/blast

v0.1.1 · 4 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

NCBI BLAST sequence alignment client with async submit/poll/retrieve workflow

25Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

alignment-viewer-2

v2.0.0-beta-23 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Alignment Viewer 2.0 is a standalone [multiple sequence alignment](https://en.wikipedia.org/wiki/Multiple_sequence_alignment) (MSA) viewer written in TypeScript with the React framework. The project is primarily aimed at performance with the goal of enabl

8Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.0.0-beta-23 (the latest release), from the OSV.dev database.

pairwasm_alignment

v0.2.1 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Experiment. Performs global and local pairwise sequence alignment through WebAssembly.

3Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.2.1 (the latest release), from the OSV.dev database.

dialign-wrapper

v1.0.0 · 8 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A node module that wraps functionality of Dialign multiple sequence alignment program

2Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0 (the latest release), from the OSV.dev database.

ntseq

v1.1.0 · 9 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Nucleotide sequence manipulation and analysis library

6.3KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.1.0 (the latest release), from the OSV.dev database.

recital-score

v0.1.1 · 22 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Score a spoken recitation against text you already know, by sequence alignment with asymmetric gap costs, so false starts, repetitions, self-corrections and recognizer noise are free, and a genuinely forgotten clause is not.

4Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

rope-sequence

v1.3.4 · 3 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Rope-based persistent sequence type

14.3MDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.3.4 (the latest release), from the OSV.dev database.

@ryan-stackwave/alignment-viewer-2

v2.0.0-beta-7 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Alignment Viewer 2.0 is a standalone [multiple sequence alignment](https://en.wikipedia.org/wiki/Multiple_sequence_alignment) (MSA) viewer written in TypeScript with the React framework. The project is primarily aimed at performance with the goal of enabl

1Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.0.0-beta-7 (the latest release), from the OSV.dev database.
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