64 packages matching “genomes”

genomes

v0.0.1 · 8 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

No description provided.

1Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.1 (the latest release), from the OSV.dev database.

gramene-taxonomy-with-genomes

v3.0.10 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Integrate gramene-trees-client taxonomy with gramene-bins-client

3Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v3.0.10 (the latest release), from the OSV.dev database.

vsm-dictionary-ensembl-genomes

v1.0.9 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Implementation of a VSM-dictionary that uses the EBI search RESTful Web Services to interact with the Ensembl Genomes database (non-vertebrate species)

16Downloads across all versions in the last 7 days, from the official npm downloads API.AGPL-3.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.9 (the latest release), from the OSV.dev database.

@pipeworx/mcp-ensembl

v0.1.0 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation

6Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.0 (the latest release), from the OSV.dev database.

@ncbijs/datasets

v0.1.1 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typed client for the NCBI Datasets API v2 (genes, genomes, taxonomy)

6Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.1 (the latest release), from the OSV.dev database.

@iflow-mcp/augmented-nature_kegg-mcp-server

v1.0.0 · 6 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Model Context Protocol server for KEGG (Kyoto Encyclopedia of Genes and Genomes) database access

9Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0 (the latest release), from the OSV.dev database.

swirlnet.geno-to-pheno

v1.0.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Convert swirlnet genomes to phenotypes

2Downloads across all versions in the last 7 days, from the official npm downloads API.Apache-2.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

@pipeworx/mcp-kegg

v0.1.0 · 2 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.0 (the latest release), from the OSV.dev database.

simple-genome-browser

v1.0.2 · 10 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

A simple extensible genome browser for small genomes, built with d3

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.2 (the latest release), from the OSV.dev database.

@citation/csl-style-tree-genetics-and-genomes

v1.0.0 · 2 years ago

90
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

CSL style for Tree Genetics & Genomes

1Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.0 (the latest release), from the OSV.dev database.

@aigx/lint

v1.2.0 · 2 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Programmatic validator for AIGX (AI Genome Exchange) genomes. Implements the AIGX 1.1 conformance checks. Built on @aigx/parser.

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.2.0 (the latest release), from the OSV.dev database.

@aigx/parser

v1.2.0 · 2 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Reference parser for AIGX (AI Genome Exchange) genomes. Zero dependencies. Text-in, data-out; data model matches the AIGX 1.1 JSON schema.

5Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.2.0 (the latest release), from the OSV.dev database.

@gmod/ucsc-hub

v2.0.13 · 13 days ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Read and write UCSC track and assembly hub files in node or the browser

4.8KDownloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v2.0.13 (the latest release), from the OSV.dev database.

@reicek/neataptic-ts

v0.1.32 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Architecture-free neural network library with genetic algorithm implementations

83Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.1.32 (the latest release), from the OSV.dev database.

ideogram

v1.53.0 · 1 year ago

95
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Chromosome visualization for the web

1.3KDownloads across all versions in the last 7 days, from the official npm downloads API.CC0-1.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.53.0 (the latest release), from the OSV.dev database.

gosling.js

v1.0.7 · 8 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

[![npm version](https://img.shields.io/npm/v/gosling.js.svg)](https://www.npmjs.com/package/gosling.js) [![editor status](https://github.com/gosling-lang/gosling.js/actions/workflows/deploy-editor.yml/badge.svg)](https://github.com/gosling-lang/gosling.js

396Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.7 (the latest release), from the OSV.dev database.

@epi2melabs/igv-jupyterlab

v1.0.1 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

igv-jupyterlab is an extension for Jupyter Lab and traditional Jupyter Notebooks which wraps igv.js.

18Downloads across all versions in the last 7 days, from the official npm downloads API.BSD-3-ClauseLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v1.0.1 (the latest release), from the OSV.dev database.

gramene-search-vis

v4.2.5 · 3 months ago

100
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Visualization used by Gramene search

9Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v4.2.5 (the latest release), from the OSV.dev database.

neatjs

v0.3.1 · 11 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

NeuroEvolution of Augmenting Topologies (NEAT) implemented in Javascript (with tests done in Mocha for verification). Can be used as a node module or in a browser

21Downloads across all versions in the last 7 days, from the official npm downloads API.MITLicense declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.3.1 (the latest release), from the OSV.dev database.

gtdb-local

v0.0.13-0 · 5 years ago

85
0-100 score computed by this site from verifiable signals only: known OSV.dev advisories affecting this exact version, how recently it was published, and the repository's OpenSSF Scorecard.

Typescript implementation of pouchDB instance loaded with the GTDB

1Downloads across all versions in the last 7 days, from the official npm downloads API.CC0-1.0License declared in the package manifest.

No known vulnerabilities

Known vulnerabilities affecting v0.0.13-0 (the latest release), from the OSV.dev database.
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